STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162204TBC1 domain family, member 7. (432 aa)    
Predicted Functional Partners:
ENSORLP00000031311
Uncharacterized protein.
    
 0.992
Tsc2
DUF3384 domain-containing protein.
    
 0.992
TSC2
TSC complex subunit 2.
    
 0.965
tsc1
TSC complex subunit 1b.
    
 0.965
LOC101156643
Ras homolog, mTORC1 binding like 1.
     
 0.951
LOC101161855
Ras homolog, mTORC1 binding.
     
 0.928
LOC101160603
Uncharacterized protein.
     
 0.928
LOC101174244
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.926
LOC101174851
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.926
LOC101155451
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.926
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.