STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfkfb16-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1. (511 aa)    
Predicted Functional Partners:
SFMBT1
Scm like with four mbt domains 1.
     
 0.821
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
     
 0.596
Psat1
Phosphoserine aminotransferase 1.
    
 0.595
kfh-r
Red-sensitive opsin; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
     
 0.595
LOC101162989
6PF2K domain-containing protein.
  
  
 
0.545
ABHD1
Abhydrolase domain containing 1.
      
 0.517
LOC101173933
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.493
pgk1
Phosphoglycerate kinase.
  
 
 0.493
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.493
enoph1
Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
     
 0.491
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.