PTBP2 protein (Oryzias latipes) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

PTBP2

Polypyrimidine tract binding protein 2a. (515 aa)

Predicted Functional Partners:

ncbp2

0.663

LOC101166731

0.650

HNRNPLL

0.650

hnrnpl

0.650

hnrnpk

0.632

LOC101167466

0.632

polr2l

0.571

NCBP1

0.570

POLR2E

0.569

polr2g

0.566

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HNRNPLL	LOC101167466	ENSORLP00000001235	ENSORLP00000029054	Heterogeneous nuclear ribonucleoprotein L like.	Heterogeneous nuclear ribonucleoprotein K, like.	0.729
HNRNPLL	NCBP1	ENSORLP00000001235	ENSORLP00000026641	Heterogeneous nuclear ribonucleoprotein L like.	Nuclear cap binding protein subunit 1.	0.567
HNRNPLL	POLR2E	ENSORLP00000001235	ENSORLP00000019213	Heterogeneous nuclear ribonucleoprotein L like.	RNA polymerase II subunit E.	0.591
HNRNPLL	PTBP2	ENSORLP00000001235	ENSORLP00000029261	Heterogeneous nuclear ribonucleoprotein L like.	Polypyrimidine tract binding protein 2a.	0.650
HNRNPLL	hnrnpk	ENSORLP00000001235	ENSORLP00000006506	Heterogeneous nuclear ribonucleoprotein L like.	Heterogeneous nuclear ribonucleoprotein K.	0.729
HNRNPLL	ncbp2	ENSORLP00000001235	ENSORLP00000014087	Heterogeneous nuclear ribonucleoprotein L like.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.644
HNRNPLL	polr2l	ENSORLP00000001235	ENSORLP00000026789	Heterogeneous nuclear ribonucleoprotein L like.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.570
LOC101166731	LOC101167466	ENSORLP00000000591	ENSORLP00000029054	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein K, like.	0.729
LOC101166731	NCBP1	ENSORLP00000000591	ENSORLP00000026641	Uncharacterized protein.	Nuclear cap binding protein subunit 1.	0.567
LOC101166731	POLR2E	ENSORLP00000000591	ENSORLP00000019213	Uncharacterized protein.	RNA polymerase II subunit E.	0.592
LOC101166731	PTBP2	ENSORLP00000000591	ENSORLP00000029261	Uncharacterized protein.	Polypyrimidine tract binding protein 2a.	0.650
LOC101166731	hnrnpk	ENSORLP00000000591	ENSORLP00000006506	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein K.	0.729
LOC101166731	ncbp2	ENSORLP00000000591	ENSORLP00000014087	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.644
LOC101166731	polr2l	ENSORLP00000000591	ENSORLP00000026789	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.570
LOC101167466	HNRNPLL	ENSORLP00000029054	ENSORLP00000001235	Heterogeneous nuclear ribonucleoprotein K, like.	Heterogeneous nuclear ribonucleoprotein L like.	0.729
LOC101167466	LOC101166731	ENSORLP00000029054	ENSORLP00000000591	Heterogeneous nuclear ribonucleoprotein K, like.	Uncharacterized protein.	0.729
LOC101167466	NCBP1	ENSORLP00000029054	ENSORLP00000026641	Heterogeneous nuclear ribonucleoprotein K, like.	Nuclear cap binding protein subunit 1.	0.563
LOC101167466	PTBP2	ENSORLP00000029054	ENSORLP00000029261	Heterogeneous nuclear ribonucleoprotein K, like.	Polypyrimidine tract binding protein 2a.	0.632
LOC101167466	hnrnpk	ENSORLP00000029054	ENSORLP00000006506	Heterogeneous nuclear ribonucleoprotein K, like.	Heterogeneous nuclear ribonucleoprotein K.	0.901
LOC101167466	hnrnpl	ENSORLP00000029054	ENSORLP00000041658	Heterogeneous nuclear ribonucleoprotein K, like.	Heterogeneous nuclear ribonucleoprotein L.	0.729