STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPLX1Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
LOC101170749
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.739
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.739
LOC101165744
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.716
LOC101157893
Syntaxin 4; Belongs to the syntaxin family.
     
 0.650
LOC101169487
Complexin 4c.
     
 0.633
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
     
 0.627
snap29
Synaptosome associated protein 29.
   
 
  0.626
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
  0.626
snap47
Synaptosome associated protein 47.
   
 
  0.626
LOC101164408
Syntaxin 3A; Belongs to the syntaxin family.
     
  0.620
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.