STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000029293Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
LOC100049520
POU domain protein.
   
 0.657
nanog
Homeobox domain-containing protein.
   
 0.616
rbbp4
Retinoblastoma binding protein 4.
   
 0.580
LOC101156710
Retinoblastoma binding protein 4, like.
   
 0.580
wdr73
Uncharacterized protein.
    
 0.528
LOC101167110
GATA zinc finger domain containing 2Ab.
    
 0.466
gatad2b
GATA zinc finger domain containing 2B.
    
 0.466
LOC101173502
Uncharacterized protein.
    
 0.466
mta3
Metastasis associated 1 family, member 3.
    
  0.439
mta1
Metastasis associated 1.
    
  0.439
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]