STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps17Mitochondrial ribosomal protein S17. (146 aa)    
Predicted Functional Partners:
mrps14
Mitochondrial ribosomal protein S14.
   
  0.995
mrps7
Mitochondrial ribosomal protein S7.
   
 0.993
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.993
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 0.991
mrps26
Mitochondrial ribosomal protein S26.
   
 0.991
dap3
Death associated protein 3.
   
 0.990
mrps22
Mitochondrial ribosomal protein S22.
   
 0.990
mrps16
Mitochondrial ribosomal protein S16.
   
 0.990
ENSORLP00000029432
Mitochondrial ribosomal protein S5.
    
  0.990
Mrps28
Mitochondrial ribosomal protein S28.
   
  0.990
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.