STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nmur1Neuromedin U receptor 1; Belongs to the G-protein coupled receptor 1 family. (435 aa)    
Predicted Functional Partners:
LOC101157195
Neurotensin.
    
 0.796
edn1
Endothelin 1.
    
 0.561
LOC101157910
Somatostatin.
    
 0.552
edn3
END domain-containing protein.
    
  0.551
penk
Uncharacterized protein.
    
 0.533
gal
Galanin/GMAP prepropeptide.
    
 0.517
LOC101168692
Prepronociceptin a.
    
  0.495
apln
Apelin.
     
 0.487
LOC101159438
Uncharacterized protein.
    
  0.486
LOC101170246
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.481
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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