STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155197Uncharacterized protein. (587 aa)    
Predicted Functional Partners:
LOC101175073
Solute carrier family 11 member 2.
  
  
 
0.901
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.636
slc30a9
Solute carrier family 30 member 9.
   
 
 0.600
aasdh
Aminoadipate-semialdehyde dehydrogenase.
      
 0.558
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.558
ccs
Copper chaperone for superoxide dismutase.
     
 0.540
mocs1
Molybdenum cofactor synthesis 1.
     
 0.536
ndfip2
Nedd4 family interacting protein 2.
   
 
 0.493
LOC101167301
Nedd4 family interacting protein 1.
   
 
 0.493
ndfip1
Nedd4 family interacting protein 1, like.
   
 
 0.493
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.