STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162120Protein phosphatase 1, regulatory subunit 15B. (555 aa)    
Predicted Functional Partners:
LOC101160970
CBM21 domain-containing protein.
     
  0.540
ppp1r3a
CBM21 domain-containing protein.
     
  0.540
H2M7S5_ORYLA
Zgc:77112.
     
  0.540
H2MGR8_ORYLA
CBM21 domain-containing protein.
     
  0.540
Ppp1r3b
Protein phosphatase 1 regulatory subunit.
     
  0.540
LOC101163073
PP1c_bdg domain-containing protein.
     
 
0.540
LOC101172331
Protein phosphatase 1, regulatory subunit 3Da.
     
  0.540
ENSORLP00000028599
Protein phosphatase 1, regulatory subunit 3Db.
     
  0.540
LOC101156960
CBM21 domain-containing protein.
     
  0.540
LOC105354194
CBM21 domain-containing protein.
     
  0.540
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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