STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex5lPeroxisomal biogenesis factor 5-like a. (634 aa)    
Predicted Functional Partners:
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.996
LOC101172485
Sterol carrier protein 2b.
   
 0.996
LOC101155936
NBR1 autophagy cargo receptor b.
    
 0.979
nbr1
NBR1 autophagy cargo receptor a.
    
 0.979
eci2
Enoyl-CoA delta isomerase 2.
   
 0.973
hsdl2
Hydroxysteroid dehydrogenase like 2.
   
 0.966
ephx2
AB hydrolase-1 domain-containing protein.
   
 0.961
pex14
Peroxisomal biogenesis factor 14.
   
 0.955
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.939
pex13
Peroxisomal biogenesis factor 13.
   
 0.938
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.