STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000029810Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
ENSORLP00000033951
Uncharacterized protein.
 
     0.950
ENSORLP00000032896
AAA_6 domain-containing protein.
 
     0.949
Dnah2
AAA_6 domain-containing protein.
 
     0.948
ENSORLP00000030896
Uncharacterized protein.
 
     0.942
ENSORLP00000042264
AAA_6 domain-containing protein.
 
     0.936
H2LSK3_ORYLA
Uncharacterized protein.
 
     0.928
H2MHV1_ORYLA
Uncharacterized protein.
 
     0.928
Dnah9
Uncharacterized protein.
 
     0.925
ENSORLP00000037746
Uncharacterized protein.
 
     0.906
Dync1h1
Dynein, cytoplasmic 1, heavy chain 1.
 
      0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.