STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163752Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
LOC101166903
Interleukin 11a.
     
 0.977
il6st
Uncharacterized protein.
   
 0.948
LOC101167043
Interleukin 12 receptor, beta 2a, like.
   
 0.916
LOC105356917
Uncharacterized protein.
   
 0.898
LOC101163013
Uncharacterized protein.
     
  0.800
LOC101161479
Interleukin 12 receptor, beta 2a.
   
 0.598
LOC101161234
Uncharacterized protein.
   
 0.598
csf3r
Colony stimulating factor 3 receptor.
   
 0.515
LOC101159642
Calmegin.
    
  0.493
canx
Calnexin.
    
  0.493
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.