STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161187P/Homo B domain-containing protein; Belongs to the peptidase S8 family. (573 aa)    
Predicted Functional Partners:
pomc
Proopiomelanocortin.
     
 0.669
LOC101164777
Uncharacterized protein.
     
 0.669
LOC100125446
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
 0.555
LOC101172253
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
 0.555
rxfp2
Relaxin family peptide receptor 2a.
   
 0.543
rxfp1
Relaxin family peptide receptor 1.
   
 0.543
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.543
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
   
 0.543
bsnd
Uncharacterized protein.
      
 0.533
USP24
Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family.
      
 0.530
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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