STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nek7NIMA-related kinase 7; Belongs to the protein kinase superfamily. (303 aa)    
Predicted Functional Partners:
NEK9
NIMA related kinase 9.
    
0.984
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
    
 
 0.734
H2L4N6_ORYLA
Uncharacterized protein.
    
 
 0.697
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
    
 
 0.610
nek3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.609
Nek1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.603
LOC101162253
Protein kinase domain-containing protein.
  
 
0.599
nek4
NIMA-related kinase 4.
  
 
0.595
nek8
NIMA-related kinase 8.
    
0.584
rcc1l
RCC1 like.
    
 0.529
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.