STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaaf3Dynein, axonemal, assembly factor 3 like. (450 aa)    
Predicted Functional Partners:
lrrc6
Leucine rich repeat containing 6.
      
 0.881
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.806
ccdc103
Dynein_attach_N domain-containing protein.
   
  
 0.801
zmynd10
Zinc finger, MYND-type containing 10.
      
 0.801
Spag1
Uncharacterized protein.
      
 0.740
ENSORLP00000036098
Dynein assembly factor 1, axonemal.
      
 0.737
wdr92
WD repeat domain 92.
   
 0.731
cfap298
Cilia and flagella associated protein 298.
      
 0.728
dnai2
Dynein axonemal intermediate chain 2a.
      
 0.726
LOC101159735
Radial spoke head component 4A.
   
  
 0.717
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.