STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000030350Versican a. (355 aa)    
Predicted Functional Partners:
LOC101165399
Uncharacterized protein.
 
     0.761
LOC101171095
Zmp:0000000846.
   
 0.482
LOC101170815
Tenascin C.
   
 0.482
hapln1
Hyaluronan and proteoglycan link protein 1a.
  
 
0.465
LOC101170789
Uncharacterized protein.
    
 0.464
ncam2
Zgc:152904.
    
 0.464
LOC101173164
Neural cell adhesion molecule 1a.
    
 0.464
ncam1
Neural cell adhesion molecule 1b.
    
 0.464
LOC101159348
Link domain-containing protein.
    
0.452
LOC101160748
Hyaluronan and proteoglycan link protein 1b.
    
0.447
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.