STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162799Zgc:154055. (558 aa)    
Predicted Functional Partners:
mtmr6
Myotubularin related protein 6.
  
0.857
LOC101157342
Myotubularin related protein 7b.
  
0.849
LOC101161735
Myotubularin related protein 7a.
  
0.847
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
 
 0.559
LOC101157977
Myotubularin related protein 1a.
  
 
0.497
mtm1
Myotubularin 1.
  
 
0.493
mtmr2
Myotubularin related protein 2.
  
 
0.493
emilin1
Uncharacterized protein.
    
  0.470
LOC101160037
Elastin microfibril interfacer 1a.
    
  0.470
MTMR4
Myotubularin related protein 4.
   
0.453
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.