STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF5Dynein axonemal assembly factor 5. (845 aa)    
Predicted Functional Partners:
cfap298
Cilia and flagella associated protein 298.
      
 0.807
dnaaf3
Dynein, axonemal, assembly factor 3 like.
      
 0.806
lrrc6
Leucine rich repeat containing 6.
      
 0.773
Spag1
Uncharacterized protein.
      
 0.768
cfap300
Cilia and flagella associated protein 300.
    
 
 0.745
ENSORLP00000036098
Dynein assembly factor 1, axonemal.
      
 0.724
pih1d3
PIH1 domain containing 3.
      
 0.718
Dnali1
Dynein, axonemal, light intermediate chain 1.
      
 0.718
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
      
 0.709
wdr92
WD repeat domain 92.
      
 0.701
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.