STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161414TSC22 domain family member 3. (216 aa)    
Predicted Functional Partners:
SGK1
Non-specific serine/threonine protein kinase.
   
 0.620
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.566
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 0.541
araf
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.541
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.541
LOC101162537
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.509
sgk2
Non-specific serine/threonine protein kinase.
   
 0.509
LOC101170578
Protein kinase domain-containing protein.
    
 
 0.506
LOC101169578
Nuclear receptor binding protein 1.
    
 
 0.506
ostf1
Osteoclast stimulating factor 1.
      
 0.501
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.