STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160355Deltex 4, E3 ubiquitin ligase a. (772 aa)    
Predicted Functional Partners:
notch1
Notch receptor 1b.
    
 0.809
LOC101171596
Notch receptor 1a.
    
 0.809
LOC101162450
Notch receptor 3.
    
 0.745
H2LGV0_ORYLA
ANK_REP_REGION domain-containing protein.
    
  0.700
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.627
wwp2
E3 ubiquitin-protein ligase.
    
 0.627
LOC101174746
E3 ubiquitin-protein ligase.
    
 0.627
LOC101167949
E3 ubiquitin-protein ligase.
    
 0.627
rps27a
Ribosomal protein S27a.
    
  0.593
LOC101165069
Fibroblast growth factor receptor like 1a.
      
 0.569
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.