STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163895Carbohydrate sulfotransferase. (339 aa)    
Predicted Functional Partners:
LOC101168778
Uncharacterized protein.
      
 0.781
SLC41A3
Solute carrier family 41 member 3.
      
 0.781
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.774
CHST15
Carbohydrate sulfotransferase 15.
      
 0.706
LOC101167818
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.703
LOC101158144
Uncharacterized protein.
      
 0.605
LOC101169113
Si:ch211-114m9.1.
      
 0.605
LOC101155457
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.599
LRRC9
Leucine rich repeat containing 9.
     
 0.590
LOC101169850
Thioredoxin reductase 3.
      
 0.589
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.