STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105356229BZIP domain-containing protein. (330 aa)    
Predicted Functional Partners:
LOC101166594
Ribosomal protein S6 kinase.
    
  0.900
LOC101160197
E1A binding protein p300 a.
   
 0.816
adcy9
CREB binding protein b.
   
 0.816
LOC101163392
CREB binding protein a.
   
 0.816
LOC101168870
E1A binding protein p300 b.
   
 0.816
mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.739
mbtps2
Membrane-bound transcription factor peptidase, site 2.
     
 0.737
crebrf
Creb3 regulatory factor.
    
 0.697
LOC101160964
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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