STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF462Zinc finger protein 462. (2535 aa)    
Predicted Functional Partners:
exd1
3'-5' exonuclease domain-containing protein.
      
 0.670
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 
 0.632
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.613
rad23a
RAD23 homolog A, nucleotide excision repair protein a.
    
 0.613
zdhhc24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.605
pgk1
Phosphoglycerate kinase.
    
 
 0.567
VPS13B
Vacuolar protein sorting 13 homolog B.
      
 0.559
gxylt1
Glucoside xylosyltransferase 1b.
      
 0.454
GXYLT1
Glucoside xylosyltransferase 1.
      
 0.454
pcyox1l
Prenylcysteine oxidase 1 like.
      
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.