STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000031454Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
Brk1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.911
LOC101164818
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.876
LOC101169438
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.855
nckap1
NCK-associated protein 1.
   
 0.830
LOC101159814
NCK associated protein 1 like.
   
 0.830
abl2
Tyrosine-protein kinase.
    
 0.797
abl1
Tyrosine-protein kinase.
    
 0.797
LOC101160681
WH2 domain-containing protein.
   
 0.736
LOC101165595
Zgc:109889.
   
 0.736
wasf3
WASP family member 3b.
   
 0.736
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.