STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000031846Uncharacterized protein. (54 aa)    
Predicted Functional Partners:
LOC101157704
Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.875
H2LZ22_ORYLA
Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.873
apln
Apelin.
      
 0.664
LOC101168707
Apelin receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.602
LOC101168199
WD_REPEATS_REGION domain-containing protein.
    
   0.439
LOC101175500
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
   0.439
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
   0.439
ol-gb1
WD_REPEATS_REGION domain-containing protein.
    
   0.439
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.