STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARD3Par-3 family cell polarity regulator. (1373 aa)    
Predicted Functional Partners:
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.986
jam3
Junctional adhesion molecule 3a.
    
 0.957
LOC105355609
F11 receptor, tandem duplicate 1.
    
 0.944
LOC101174366
T cell lymphoma invasion and metastasis 1b.
    
 0.925
LOC101168439
Par-6 family cell polarity regulator alpha.
    
 0.922
LOC101174688
Junctional adhesion molecule 3b.
    
 0.918
LOC101170697
Nectin cell adhesion molecule 3b.
   
 0.913
LOC101163673
Occludin a.
    
 0.910
LOC101172858
Uncharacterized protein.
    
  0.906
LOC101173666
Uncharacterized protein.
    
  0.906
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.