STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111947425Golgin A7. (151 aa)    
Predicted Functional Partners:
zdhhc9
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.706
zdhhc8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.659
zdhhc5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.580
LOC101159242
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.580
LOC101157234
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.556
LOC101173704
ORM1-like protein; Negative regulator of sphingolipid synthesis.
   
 
  0.551
LOC111946406
ORM1-like protein; Negative regulator of sphingolipid synthesis.
   
 
  0.551
golga7b
Golgin A7 family member B.
  
  
 
0.548
LOC101168845
Erf4 domain-containing protein.
  
  
 
0.547
GOLGA7
Golgin A7.
  
  
 
0.545
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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