STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa0586Uncharacterized protein. (1314 aa)    
Predicted Functional Partners:
cep120
Centrosomal protein 120.
    
 0.597
dact1
Dishevelled binding antagonist of beta catenin 1.
      
 0.559
cep97
Centrosomal protein 97.
   
 
 0.498
ofd1
OFD1 centriole and centriolar satellite protein.
   
 
 0.494
C2cd3
Uncharacterized protein.
      
 0.485
ift88
Intraflagellar transport 88 homolog.
    
 0.474
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.454
wdr18
WD repeat domain 18.
   
 0.435
Timm9
zf-Tim10_DDP domain-containing protein.
   
  
 0.424
LOC101166817
Nuclear protein, ataxia-telangiectasia locus.
   
  0.417
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.