STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000032243Kalirin RhoGEF kinase b. (446 aa)    
Predicted Functional Partners:
ENSORLP00000034808
Uncharacterized protein.
 
   
  0.910
ENSORLP00000036348
Protein kinase domain-containing protein.
 
   
  0.892
LOC101163818
Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.
 
      0.533
LOC101167719
Uncharacterized protein.
    
 0.484
LOC101168134
Guanine nucleotide binding protein (G protein), alpha 14.
    
 0.484
LOC101168718
Uncharacterized protein.
    
 0.484
LOC101168962
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.484
LOC101161353
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.484
LOC101158934
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.484
LOC101157684
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.484
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.