STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scapSREBF chaperone. (1355 aa)    
Predicted Functional Partners:
srebf1
Sterol regulatory element binding transcription factor 1.
   
 0.968
srebf2
Sterol regulatory element binding transcription factor 2.
   
 0.968
insig1
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family.
   
 0.948
npc2
Niemann-Pick disease, type C2.
   
 0.883
mycn
MYCN proto-oncogene, bHLH transcription factor.
   
 0.820
mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.778
mbtps2
Membrane-bound transcription factor peptidase, site 2.
      
 0.559
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.456
ogfod1
2-oxoglutarate and iron-dependent oxygenase domain containing 1.
      
 0.455
hm13
Histocompatibility (minor) 13.
      
 0.453
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.