STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nutf2Nuclear transport factor 2. (127 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.999
fancg
Uncharacterized protein.
   
 0.966
fancl
FA complementation group L.
    
 0.945
fancf
FA complementation group F.
    
 0.944
fancc
FA complementation group C.
   
 0.944
fancb
FA complementation group B.
    
 0.943
faap24
FA core complex associated protein 24.
   
 0.939
fshb
Cys_knot domain-containing protein.
   
 0.906
cenpx
Uncharacterized protein.
    
 0.906
LOC101172571
FA complementation group D2.
   
 0.891
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.