STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000032452Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
ENSORLP00000035647
Uncharacterized protein.
    
 0.940
boc
BOC cell adhesion associated, oncogene regulated.
     
 0.904
cdon
Cell adhesion associated, oncogene regulated.
     
 0.904
H2LCR5_ORYLA
Growth arrest-specific 1b.
     
 0.902
LOC101160152
Uncharacterized protein.
     
 0.902
gas1
Growth arrest-specific 1a.
     
 0.902
ptch2
Patched 2.
     
 0.902
ENSORLP00000042182
Uncharacterized protein.
 
   
  0.901
ptch1
Patched 1.
     
 0.900
H2LUH7_ORYLA
Uncharacterized protein.
 
   
  0.900
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.