STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000032532Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.498
LOC101164400
Uncharacterized protein.
   
 0.498
rhof
Ras homolog family member F.
    
 0.452
RND1
Rho family GTPase 1.
    
 0.434
LOC101168783
Rho family GTPase 1b.
    
 0.434
rnd3
Rho family GTPase 3a.
    
 0.434
H2LP85_ORYLA
Ras homolog gene family, member Gd.
   
 0.426
LOC101162944
Ras homolog family member Gb.
   
 0.426
prickle3
Prickle homolog 3.
    
 
 0.402
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.