STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156437Uncharacterized protein. (898 aa)    
Predicted Functional Partners:
lamb1
Laminin, beta 1a.
   
0.873
lamb2
Laminin, beta 2 (laminin S).
   
0.873
LOC101165682
Laminin, beta 1b.
   
0.865
LOC101158765
Laminin, beta 2-like.
   
0.865
H2M6A1_ORYLA
Uncharacterized protein.
   
0.819
ENSORLP00000041473
Uncharacterized protein.
   
 0.819
lamb3
Uncharacterized protein.
   
0.800
H2MQX0_ORYLA
Si:ch211-241e1.3.
   
0.746
lama4
Laminin, alpha 4.
   
0.746
H2MZJ3_ORYLA
Laminin, alpha 5.
   
0.746
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.