STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clcf1Cardiotrophin-like cytokine factor 1. (492 aa)    
Predicted Functional Partners:
cntfr
Ciliary neurotrophic factor receptor.
     
 0.923
LOC101158950
LIF receptor subunit alpha a.
     
 0.922
LOC105357584
Uncharacterized protein.
     
 0.922
il6st
Uncharacterized protein.
     
 0.915
LOC101167043
Interleukin 12 receptor, beta 2a, like.
     
  0.902
LOC101163013
Uncharacterized protein.
   
 
  0.900
LOC105356917
Uncharacterized protein.
     
  0.900
crlf1
Cytokine receptor-like factor 1a.
     
 0.682
LOC101155198
Si:dkey-16l2.16.
   
 0.540
ift27
Intraflagellar transport 27.
   
 0.540
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.