STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158892Interferon regulatory factor 3. (463 aa)    
Predicted Functional Partners:
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.989
LOC101154981
Toll-like receptor adaptor molecule 1.
    
 0.982
tbk1
TANK-binding kinase 1.
   
 0.976
pin1
Peptidyl-prolyl cis-trans isomerase.
   
 0.972
sting1
Transmembrane protein 173.
    
 0.968
adcy9
CREB binding protein b.
    
 0.966
LOC101163392
CREB binding protein a.
    
 0.966
LOC101160197
E1A binding protein p300 a.
    
 0.935
LOC101168870
E1A binding protein p300 b.
    
 0.935
card9
Caspase recruitment domain family, member 9.
   
 
 0.914
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.