STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161292Tyrosinase-related protein 1b. (540 aa)    
Predicted Functional Partners:
dct
Dopachrome tautomerase.
  
 
0.918
tyrp1
Tyrosinase related protein 1.
  
 
0.913
Mc1r
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
    
 0.781
pmel
Premelanosome protein a.
   
  
 0.740
oca2
CitMHS domain-containing protein.
   
  
 0.733
TYR
Tyrosinase.
  
 
0.724
MLANA
Uncharacterized protein.
   
  
 0.723
slc45a2
Uncharacterized protein.
   
  
 0.704
gpr143
G protein-coupled receptor 143.
   
 
 0.677
LOC101163732
Microphthalmia-associated transcription factor 2 isoform m.
    
 0.643
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.