STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmdn1Regulator of microtubule dynamics 1. (323 aa)    
Predicted Functional Partners:
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.554
LOC101159762
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.527
gpam
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.494
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.430
palb2
PALB2_WD40 domain-containing protein.
  
 0.430
LOC101161012
Lysophosphatidylcholine acyltransferase 4.
     
 0.428
mboat2
Membrane bound O-acyltransferase domain containing 2a; Belongs to the membrane-bound acyltransferase family.
   
 0.428
LOC101156981
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
  
 
 0.422
LOC105353580
Stearoyl-CoA desaturase b; Belongs to the fatty acid desaturase type 1 family.
    
 0.416
LOC101160599
Stearoyl-CoA desaturase; Belongs to the fatty acid desaturase type 1 family.
    
 0.416
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.