Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101159038 | LOC101164263 | ENSORLP00000016388 | ENSORLP00000033598 | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | WD repeat domain 37. | 0.642 |
LOC101159038 | taf10 | ENSORLP00000016388 | ENSORLP00000045875 | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | 0.999 |
LOC101159038 | taf12 | ENSORLP00000016388 | ENSORLP00000027474 | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.999 |
LOC101159038 | taf2 | ENSORLP00000016388 | ENSORLP00000040347 | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.999 |
LOC101164263 | LOC101159038 | ENSORLP00000033598 | ENSORLP00000016388 | WD repeat domain 37. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.642 |
LOC101164263 | PACS1 | ENSORLP00000033598 | ENSORLP00000034509 | WD repeat domain 37. | Phosphofurin acidic cluster sorting protein 1a. | 0.787 |
LOC101164263 | cpsf1 | ENSORLP00000033598 | ENSORLP00000027997 | WD repeat domain 37. | Cleavage and polyadenylation specific factor 1. | 0.630 |
LOC101164263 | ift140 | ENSORLP00000033598 | ENSORLP00000042361 | WD repeat domain 37. | Intraflagellar transport 140 homolog (Chlamydomonas). | 0.708 |
LOC101164263 | mad2l1 | ENSORLP00000033598 | ENSORLP00000025740 | WD repeat domain 37. | HORMA domain-containing protein. | 0.653 |
LOC101164263 | taf10 | ENSORLP00000033598 | ENSORLP00000045875 | WD repeat domain 37. | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | 0.640 |
LOC101164263 | taf12 | ENSORLP00000033598 | ENSORLP00000027474 | WD repeat domain 37. | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.644 |
LOC101164263 | taf2 | ENSORLP00000033598 | ENSORLP00000040347 | WD repeat domain 37. | TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.640 |
LOC101164263 | tex10 | ENSORLP00000033598 | ENSORLP00000011062 | WD repeat domain 37. | Testis expressed 10. | 0.636 |
LOC101164263 | wdr48 | ENSORLP00000033598 | ENSORLP00000014694 | WD repeat domain 37. | WD repeat domain 48b. | 0.696 |
PACS1 | LOC101164263 | ENSORLP00000034509 | ENSORLP00000033598 | Phosphofurin acidic cluster sorting protein 1a. | WD repeat domain 37. | 0.787 |
cpsf1 | LOC101164263 | ENSORLP00000027997 | ENSORLP00000033598 | Cleavage and polyadenylation specific factor 1. | WD repeat domain 37. | 0.630 |
ift140 | LOC101164263 | ENSORLP00000042361 | ENSORLP00000033598 | Intraflagellar transport 140 homolog (Chlamydomonas). | WD repeat domain 37. | 0.708 |
mad2l1 | LOC101164263 | ENSORLP00000025740 | ENSORLP00000033598 | HORMA domain-containing protein. | WD repeat domain 37. | 0.653 |
taf10 | LOC101159038 | ENSORLP00000045875 | ENSORLP00000016388 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.999 |
taf10 | LOC101164263 | ENSORLP00000045875 | ENSORLP00000033598 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | WD repeat domain 37. | 0.640 |
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