STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000033689Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
Maml3
Uncharacterized protein.
 
      0.899
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.771
notch1
Notch receptor 1b.
    
 0.657
LOC101171596
Notch receptor 1a.
    
 0.657
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.580
LOC101157282
CCCTC-binding factor (zinc finger protein).
    
 0.572
grm5
Glutamate receptor, metabotropic 5b.
      
 0.560
LOC101160447
RAN binding protein 2.
   
 0.521
ND4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
 
 0.481
zfand4
Zinc finger, AN1-type domain 4.
    
 0.472
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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