STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000033705Spatacsin_C domain-containing protein. (1073 aa)    
Predicted Functional Partners:
zfyve26
Zinc finger, FYVE domain containing 26.
   
 
 0.799
ap5z1
Adaptor related protein complex 5 subunit zeta 1.
    
 
 0.718
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
      
 0.690
gak
Cyclin G associated kinase.
      
 0.690
Tecpr2
Uncharacterized protein.
   
  
 0.689
ENSORLP00000036593
Uncharacterized protein.
   
  
 0.689
spg21
SPG21 abhydrolase domain containing, maspardin.
      
 0.673
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.630
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
    
 
 0.577
ap5m1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.577
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.