STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000033841Uncharacterized protein. (116 aa)    
Predicted Functional Partners:
Mtor
Serine/threonine-protein kinase TOR.
   
 0.920
clip1
CAP-GLY domain containing linker protein 1a.
     
 
0.900
H2L7L6_ORYLA
Uncharacterized protein.
 
      0.899
bub3
BUB3 mitotic checkpoint protein.
    
 0.630
LOC101162870
Dynactin 1a.
    
 
 0.627
LOC101166919
Dynactin 1b.
    
 
 0.627
nudc
NudC nuclear distribution protein.
     
 0.620
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.610
clip2
CAP-GLY domain containing linker protein 2.
 
      0.574
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.573
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.