STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smim13Small integral membrane protein 13. (88 aa)    
Predicted Functional Partners:
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
   
 
 0.923
hypk
Huntingtin interacting protein K.
   
 
 0.891
naa50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
   
 
 0.785
kat14
Lysine acetyltransferase 14.
   
 
 0.785
naa60
N-acetyltransferase 15 (GCN5-related, putative).
   
 
 0.785
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.698
Rpl35
Ribosomal protein L35.
   
 
 0.684
rpl31
Ribosomal protein L31.
   
   0.640
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.590
LOC101160979
Ribosomal protein L10.
   
 
 0.587
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.