STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000033933B-block_TFIIIC domain-containing protein. (287 aa)    
Predicted Functional Partners:
Gtf3c1
Uncharacterized protein.
 
  
  0.960
gtf3c5
General transcription factor IIIC, polypeptide 5.
   
 0.957
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.955
gtf3c2
General transcription factor IIIC, polypeptide 2, beta.
   
 0.955
gtf3c4
General transcription factor IIIC, polypeptide 4.
   
 0.943
LOC101173800
Myb_DNA-bind_7 domain-containing protein.
    
 0.909
LOC101163291
BRF1 RNA polymerase III transcription initiation factor subunit.
   
 
 0.793
H2MVC6_ORYLA
TFIIB-type domain-containing protein.
   
 
 0.793
ENSORLP00000036416
TFIIB domain-containing protein.
   
 
 0.793
gtf3c6
TFIIIC_sub6 domain-containing protein.
     
  0.780
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.