STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddcUncharacterized protein. (484 aa)    
Predicted Functional Partners:
tph2
Tryptophan hydroxylase 2.
   
 0.975
tph1
Uncharacterized protein.
   
 0.975
aanat1b
Arylalkylamine N-acetyltransferase 1b.
     
 0.963
aanat
N-acetyltransferase domain-containing protein.
     
 0.962
dbh
Dopamine beta-hydroxylase (dopamine beta-monooxygenase).
   
 
 0.961
aanat2
Arylalkylamine N-acetyltransferase 2.
   
 
 0.958
th
Tyrosine hydroxylase 1.
   
 0.956
th2
BH4_AAA_HYDROXYL_2 domain-containing protein.
   
 0.947
pah
Phenylalanine hydroxylase.
   
 0.944
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
  
 
 0.930
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.