TMCC3-2 protein (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

TMCC3-2

Uncharacterized protein. (475 aa)

Predicted Functional Partners:

erc2

0.622

ERC2

0.622

atp2b2

0.589

atp2b3

0.589

LOC101165857

0.523

prickle3

0.523

LOC101168539

0.520

prickle2

0.518

PRICKLE1

0.518

tmtc4

0.414

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERC2	LOC101165857	ENSORLP00000035459	ENSORLP00000027692	Uncharacterized protein.	Uncharacterized protein.	0.510
ERC2	LOC101168539	ENSORLP00000035459	ENSORLP00000043288	Uncharacterized protein.	Prickle homolog 2a.	0.507
ERC2	PRICKLE1	ENSORLP00000035459	ENSORLP00000036330	Uncharacterized protein.	Prickle homolog 1a.	0.504
ERC2	TMCC3-2	ENSORLP00000035459	ENSORLP00000034197	Uncharacterized protein.	Uncharacterized protein.	0.622
ERC2	atp2b2	ENSORLP00000035459	ENSORLP00000026384	Uncharacterized protein.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.589
ERC2	atp2b3	ENSORLP00000035459	ENSORLP00000029520	Uncharacterized protein.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.589
ERC2	prickle2	ENSORLP00000035459	ENSORLP00000010202	Uncharacterized protein.	Prickle homolog 2b.	0.505
ERC2	prickle3	ENSORLP00000035459	ENSORLP00000040403	Uncharacterized protein.	Prickle homolog 3.	0.510
LOC101165857	ERC2	ENSORLP00000027692	ENSORLP00000035459	Uncharacterized protein.	Uncharacterized protein.	0.510
LOC101165857	TMCC3-2	ENSORLP00000027692	ENSORLP00000034197	Uncharacterized protein.	Uncharacterized protein.	0.523
LOC101165857	atp2b2	ENSORLP00000027692	ENSORLP00000026384	Uncharacterized protein.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.520
LOC101165857	atp2b3	ENSORLP00000027692	ENSORLP00000029520	Uncharacterized protein.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.520
LOC101165857	erc2	ENSORLP00000027692	ENSORLP00000033855	Uncharacterized protein.	ELKS/RAB6-interacting/CAST family member 2.	0.510
LOC101168539	ERC2	ENSORLP00000043288	ENSORLP00000035459	Prickle homolog 2a.	Uncharacterized protein.	0.507
LOC101168539	TMCC3-2	ENSORLP00000043288	ENSORLP00000034197	Prickle homolog 2a.	Uncharacterized protein.	0.520
LOC101168539	atp2b2	ENSORLP00000043288	ENSORLP00000026384	Prickle homolog 2a.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.517
LOC101168539	atp2b3	ENSORLP00000043288	ENSORLP00000029520	Prickle homolog 2a.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.517
LOC101168539	erc2	ENSORLP00000043288	ENSORLP00000033855	Prickle homolog 2a.	ELKS/RAB6-interacting/CAST family member 2.	0.507
PRICKLE1	ERC2	ENSORLP00000036330	ENSORLP00000035459	Prickle homolog 1a.	Uncharacterized protein.	0.504
PRICKLE1	TMCC3-2	ENSORLP00000036330	ENSORLP00000034197	Prickle homolog 1a.	Uncharacterized protein.	0.518