STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adam22ADAM metallopeptidase domain 22. (952 aa)    
Predicted Functional Partners:
lgi3
Leucine-rich repeat LGI family, member 3.
     
 0.925
rundc3b
RUN domain containing 3b.
     
 0.611
PRSS23
Serine protease 23.
      
 0.602
LOC101167242
Leucine-rich repeat LGI family, member 2a.
     
 0.583
LOC101171883
Leucine-rich repeat LGI family, member 2b.
     
 0.583
slc25a40
Solute carrier family 25 member 40; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.538
adam23
ADAM metallopeptidase domain 23.
  
 
0.529
LOC101170278
Serine protease; Belongs to the peptidase S1B family.
      
 0.510
dlg3
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
   
 0.496
LOC101159214
Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family.
   
 0.496
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.