STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169128RNA binding motif protein 4.3. (346 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer binding factor 2.
   
 
 0.514
runx2
Runt-related transcription factor.
    
  0.481
LOC101160370
Runt-related transcription factor.
    
  0.481
LOC101173202
RUNX family transcription factor 1.
    
  0.481
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
   0.453
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.442
LOC101162697
Serine and arginine rich splicing factor 1a.
   
 
 0.440
LOC101171767
Uncharacterized protein.
   
 
 0.440
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
  
 0.436
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.434
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]