STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162795Fatty acid binding protein 11a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)    
Predicted Functional Partners:
LOC101156833
Fatty acid binding protein 3, muscle and heart; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
  
  
0.907
pparg
Uncharacterized protein.
   
 0.614
H2LU71_ORYLA
Fatty acid binding protein 10b, liver basic.
      
 0.588
LOC101169065
Fatty acid binding protein 6, ileal (gastrotropin).
   
 
 0.548
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.534
LOC101155461
Fatty acid binding protein 10a, liver basic.
      
 0.529
ppard
Uncharacterized protein.
    
 0.480
mttp
Microsomal triglyceride transfer protein.
   
  
 0.457
LOC100125533
Uncharacterized protein.
   
 0.423
Cebpa
CCAAT enhancer binding protein alpha.
     
 0.418
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.