STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c16h8orf37Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
aff4
AF4/FMR2 family, member 4.
      
 0.642
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.560
atxn2
Ataxin 2.
      
 0.560
ptger3
Prostaglandin E receptor 3 (subtype EP3).
      
 0.560
ttc8
Tetratricopeptide repeat domain 8.
      
 0.559
ofd1
OFD1 centriole and centriolar satellite protein.
      
 0.559
ift172
Intraflagellar transport 172.
      
 0.558
atxn10
Ataxin 10.
      
 0.479
LOC101169625
Uncharacterized protein.
      
 0.457
LOC101175201
LsmAD domain-containing protein.
      
 0.410
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.